RFR: 8324950: IGV: save the state to a file [v22]
Tobias Holenstein
tholenstein at openjdk.org
Thu Apr 11 07:35:44 UTC 2024
On Wed, 10 Apr 2024 15:04:19 GMT, Tobias Holenstein <tholenstein at openjdk.org> wrote:
>> The current workflow in IGV is the following:
>> 1) import an XML file with graphs or send via network
>> 2) open or more graphs in a tab
>> 3) extract a set of nodes to be displayed in the tab
>> 4) close IGV and start from 1) again
>>
>> The idea of this RFE is to save the opened graph tabs and extracted nodes of a graph in the `graph.xml` file.
>> ### The new workflow
>>
>> When opening IGV the user gets an empty workspace without any opened files.
>> - Graphs can be sent via the network to IGV
>> - Graph can be opened from an XML file
>> <img width="260" alt="empty" src="https://github.com/openjdk/jdk/assets/71546117/ed4b572a-f6dc-4ea0-bc45-45d21cfe3ecc">
>>
>> Unzipping this [example_graph.zip](https://github.com/openjdk/jdk/files/14933957/example_graph.zip) and opening `graphs.xml`
>> shows the following graph. New with this RFE is that opened graph tabs and extracted nodes are saved to the `graph.xml` file and restored when re-opening the `graphs.xml`:
>>
>> <img width="739" alt="graph" src="https://github.com/openjdk/jdk/assets/71546117/ad65c000-0fb3-440f-94f7-5777dc87ac8e">
>>
>> A new `<graphStates>` is introduced in `graphs.xml` that stores the opened graphs and their visible nodes:
>>
>> <graphDocument>
>> <group>
>> <graph>
>> <properties>...</properties>
>> <nodes>...</nodes>
>> <edges>...</edges>
>> <controlFlow>...</controlFlow>
>> <graphStates>
>> <state>
>> <difference value="0"/>
>> <visibleNodes>
>> <node id="0"/>
>> <node id="1"/>
>> <node id="3"/>
>> </visibleNodes >
>> </state>
>> </graphStates>
>> </graph>
>> </group>
>> </graphDocument>
>>
>>
>> The workspace menu is restructured:
>>
>> <img width="47" alt="open" src="https://github.com/openjdk/jdk/assets/71546117/d92fffdb-6431-4ac6-b21c-7d7b89d36ef5">
>>
>> - `Open` allows the user to open an XML file. In IGV there is either no XML opened indicated as `untitled` or exactly one xml file opened. It's not possible to have two XML files opened at the same time:
>>
>> <img width="101" alt="save" src="https://github.com/openjdk/jdk/assets/71546117/46a9e945-7f5c-4777-a66d-2fc8a95705c3">
>>
>> - `Save..` saves the current opened xml file. Create a new file if no file is opened.
>> - `Save as...` save the current graphs as a copy to an xml file.
>> Note: there...
>
> Tobias Holenstein has updated the pull request incrementally with two additional commits since the last revision:
>
> - Fix: highlight nodes from imported tabs
> - visibleNodes instead of hiddenNodes
I updated the PR: save the visibleNodes instead of the hiddenNodes. This is way more memory efficient. Especially for large graphs.
PR is ready for review again!
-------------
PR Comment: https://git.openjdk.org/jdk/pull/17630#issuecomment-2049102830
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