AW: G1 GC - pauses much larger than target

Chi Ho Kwok chkwok at digibites.nl
Tue Feb 25 03:26:59 PST 2014


We're running CMS and with the default swappiness, Linux swaps out huge
chunks of idle, not actively used reserve memory; from the OS point of
view, it's malloc'ed memory that isn't used for hours, but oh dear when CMS
does a full sweep and clean them up... Swapstorm ahoy.

vm.swappiness is the first thing we change on an os install.


Kind regards,

Chi Ho Kwok
On 25 Feb 2014 10:55, "Andreas Müller" <Andreas.Mueller at mgm-tp.com> wrote:

>  Hi Kirti,
>
>
>
> thanks.
>
> > I tried with swappiness set to 0
>
> Interesting. This means then, that the Linux kernel was swapping around
> with no real need? I am surprised to read this but it  explains the long
> real time and the low usr time from your logs. I have sometimes seen GC
> logs from Linux which strangely looked like swapping without any shortage
> of physical RAM (which I can't remember seeing on Solaris). This difference
> is  worth keeping in mind!
>
>
>
> > I am yet to find out if this improvement is because of setting
> swappiness to 0 or cutting down on the IO.
>
> I assume that swappiness is the prime factor here. Without swapping, why
> should a JVM care about the IO of another process? I would be rather
> shocked (and eye Linux with a lot more suspicion) if it were different.
>
>
>
> Can you tell whether other collectors (e.g. CMS) also suffered from idle
> GC pauses when you ran them with swappiness set to the default of 60?
>
>
>
> Best regards
>
> Andreas
>
>
>
> *Von:* Kirti Teja Rao [mailto:kirtiteja at gmail.com]
> *Gesendet:* Dienstag, 25. Februar 2014 02:30
> *An:* Andreas Müller
> *Cc:* hotspot-gc-use at openjdk.java.net
> *Betreff:* Re: G1 GC - pauses much larger than target
>
>
>
> Hi,
>
>
>
> I tried with swappiness set to 0 and turned off all the logging of the
> other application that is running on the same machine to cut down on the io
> on the machine. The results are much better and all the large outliers with
> over 100ms and upto 500-600 msec are gone now. I see pauses around
> 50ms-60ms for a pause target of 30ms which is ok to work with. Attached is
> the scatter chart comparison from excel with one of the earlier runs and
> this run. It is also interesting to see there are less number of gcs but
> slightly more pause interval per gc in this run.
>
>
>
> I am yet to find out if this improvement is because of setting swappiness
> to 0 or cutting down on the IO. Will do individual runs tomorrow or day
> after and will update the thread about the findings.
>
>
>
>
>
> On Sat, Feb 22, 2014 at 8:09 AM, Andreas Müller <
> Andreas.Mueller at mgm-tp.com> wrote:
>
> Hi Kirti,
>
>
>
> > [Times: user=0.06 sys=0.00, real=1.54 secs] real time being far greater
> than user time,
>
> That's extreme.
>
> But running several JVMs on the same hardware can produce such a
> phenomenon on a smaller scale. I usually observe an increase of pause times
> when two JVMs compete for the CPUs by a factor between sqrt(2) and 2 which
> I understand from a statistical point of view.
>
>
>
> I have also got the impression that G1 is much more sensitive to CPU
> contention (even well below 100% load) than other collectors.
>
> I have attached a GC log graphic where one JVM runs G1 on a 25 GB heap for
> 30 minutes when after 15 minutes a second JVM with exactly the same
> settings starts to compete for the CPUs (and other system resources). It is
> clearly visible from the plot that the second JVM has a huge impact on the
> operation of the first one.:
>
> -        Long pauses jump from a max of 250 millis to 700 millis (almost
> a factor of 3)
>
> -        G1 sharply decreases the new generation size (probably to regain
> control of pause times because the target is at default value, i.e. 200
> millis)
>
> The statistics on the right hand side are taken only from the time period
> where both JVMs compete.
>
> My impression is that G1 does not like sharing CPUs with other processes.
> It probably spoils its ability to predict pause durations properly.
>
>
>
> Your example with a 2 GB heap looks much more extreme, however.
>
> It looks like your GC threads are almost being starved by something.
>
> I would be very happy to learn about the reason if any can be found.
>
>
>
> Best regards
>
> Andreas
>
>
>
> *Von:* Kirti Teja Rao [mailto:kirtiteja at gmail.com]
> *Gesendet:* Freitag, 21. Februar 2014 20:28
> *An:* Andreas Müller
>
>
> *Cc:* hotspot-gc-use at openjdk.java.net
> *Betreff:* Re: G1 GC - pauses much larger than target
>
>
>
> Hi,
>
>
>
> @Jenny - CPU looks fine. Never over 40% and generally between 25-35%. Some
> of these pauses are as large as 1 second and these are always observed
> after the parallel phase, I assume this is the phase were G1 would need the
> most amount of CPU.
>
>
>
> @Andreas - Most of these pauses are in young collection and are not
> showing in the parallel/serial phases shown in GC log. The pauses i observe
> are unreasonable 1.5+ sec for a heap of 2 GB.
>
>
>
> @All - [Times: user=0.06 sys=0.00, real=1.54 secs] real time being far
> greater than user time, I believe G1 is blocked on some resource. The
> application i run is not swapping and also there is more headroom in
> memory. CPU is less than 35%.There are other applications running on the
> machine which log quite a bit and can cause the iowait avg queue size to
> spike upto 20-30 occasionally. Does G1 logging happen during the pause
> time? Can a slow disk or high disk IO affect these timings?
>
>
>
> Is there anything else that we can try to uncover the cause for these
> pauses?
>
>
>
>
>
> 2014-02-21T06:18:13.592+0000: 12675.969: Application time: 10.7438770
> seconds
>
> 2014-02-21T06:18:13.593+0000: 12675.970: [GC pause (young)
>
> Desired survivor size 81788928 bytes, new threshold 15 (max 15)
>
> - age   1:     564704 bytes,     564704 total
>
> - age   2:      18504 bytes,     583208 total
>
> - age   3:      18552 bytes,     601760 total
>
> - age   4:      18776 bytes,     620536 total
>
> - age   5:     197048 bytes,     817584 total
>
> - age   6:      18712 bytes,     836296 total
>
> - age   7:      18456 bytes,     854752 total
>
> - age   8:      18920 bytes,     873672 total
>
> - age   9:      18456 bytes,     892128 total
>
> - age  10:      18456 bytes,     910584 total
>
> - age  11:      18456 bytes,     929040 total
>
> - age  12:      18456 bytes,     947496 total
>
> - age  13:      18488 bytes,     965984 total
>
> - age  14:      18456 bytes,     984440 total
>
> - age  15:      18456 bytes,    1002896 total
>
>  12675.970: [G1Ergonomics (CSet Construction) start choosing CSet,
> _pending_cards: 4408, predicted base time: 6.77 ms, remaining time: 23.23
> ms, target pause time: 30.00 ms]
>
>  12675.970: [G1Ergonomics (CSet Construction) add young regions to CSet,
> eden: 306 regions, survivors: 1 regions, predicted young region time: 1.89
> ms]
>
>  12675.970: [G1Ergonomics (CSet Construction) finish choosing CSet, eden:
> 306 regions, survivors: 1 regions, old: 0 regions, predicted pause time:
> 8.67 ms, target pause time: 30.00 ms]
>
> , 0.0079290 secs]
>
>    [Parallel Time: 6.0 ms, GC Workers: 9]
>
>       [GC Worker Start (ms): Min: 12675970.1, Avg: 12675970.3, Max:
> 12675970.8, Diff: 0.7]
>
>       [Ext Root Scanning (ms): Min: 3.0, Avg: 4.0, Max: 5.0, Diff: 1.9,
> Sum: 36.3]
>
>       [Update RS (ms): Min: 0.0, Avg: 0.5, Max: 0.9, Diff: 0.9, Sum: 4.1]
>
>          [Processed Buffers: Min: 0, Avg: 5.4, Max: 13, Diff: 13, Sum: 49]
>
>       [Scan RS (ms): Min: 0.0, Avg: 0.1, Max: 0.2, Diff: 0.2, Sum: 0.9]
>
>       [Object Copy (ms): Min: 0.3, Avg: 0.7, Max: 0.9, Diff: 0.6, Sum: 6.5]
>
>       [Termination (ms): Min: 0.0, Avg: 0.2, Max: 0.3, Diff: 0.3, Sum: 2.0]
>
>       [GC Worker Other (ms): Min: 0.0, Avg: 0.0, Max: 0.0, Diff: 0.0, Sum:
> 0.2]
>
>       [GC Worker Total (ms): Min: 5.1, Avg: 5.6, Max: 5.8, Diff: 0.8, Sum:
> 50.1]
>
>       [GC Worker End (ms): Min: 12675975.8, Avg: 12675975.9, Max:
> 12675975.9, Diff: 0.1]
>
>    [Code Root Fixup: 0.0 ms]
>
>    [Clear CT: 0.5 ms]
>
>    [Other: 1.4 ms]
>
>       [Choose CSet: 0.0 ms]
>
>       [Ref Proc: 0.5 ms]
>
>       [Ref Enq: 0.0 ms]
>
>       [Free CSet: 0.7 ms]
>
>    [Eden: 1224.0M(1224.0M)->0.0B(1224.0M) Survivors: 4096.0K->4096.0K
> Heap: 1342.2M(2048.0M)->118.1M(2048.0M)]
>
>  [Times: user=0.06 sys=0.00, real=1.54 secs]
>
> 2014-02-21T06:18:15.135+0000: 12677.511: Total time for which application
> threads were stopped: 1.5421650 seconds
>
>
>
>
>
> On Fri, Feb 21, 2014 at 12:38 AM, Andreas Müller <
> Andreas.Mueller at mgm-tp.com> wrote:
>
> Hi Kirti,
>
>
>
> > I am trying out G1 collector for our application. Our application runs
> with 2GB heap and we expect relatively low latency.
>
> > The pause time target is set to 25ms. There >are much bigger pauses (and
> unexplained) in order of few 100s of ms.
>
> > This is not a rare occurence and i can see this 15-20 times in 6-7 hours
> runs.
>
>
>
> This conforms to what I have observed in extended tests:
>
> G1's control of GC pause duration is limited to a rather narrow range.
>
> Even in that range, only new gen pauses do follow the pause time target
> well while "mixed" pauses tend to overshoot with considerable probability.
>
> Find attached a graphic which shows what I mean:
>
> -        New gen pauses (red) do follow the target very well from 150-800
> millis
>
> -        With a target below 150 the actual new gen pauses remain flat at
> 150-180 millis
>
> -        "mixed" pauses (blue) do not follow the target well and some of
> them will always take 500-700 millis, whatever the target be
>
> -        There are other pauses (remark etc., green) which are short but
> completely independent of the target value
>
>
>
> The range with reasonable control depends on the heap size, the
> application and the hardware.
>
> I measured the graphic attached on a 6-core Xeon/2GHz server running Java
> 7u45 on CentOS/Linux with 64 GB RAM and a heap size of -Xms50g -Xmx50g.
>
> (For which the pause durations achieved are not bad at all!)
>
> The application was a synthetic benchmark described here:
> http://blog.mgm-tp.com/2013/12/benchmarking-g1-and-other-java-7-garbage-collectors/
>
> With the same benchmark but only 10 GB of overall heap size on a Oracle T3
> server running Java 7u45 on Solaris/SPARC I got a very similar kind of plot
> but the range with reasonable pause time control was now 60-180 millis.
>
> Again the pause durations reached were by themselves not bad at all. But
> the idea of setting a pause time target and expecting it to be followed in
> a meaningful way is to some extent misleading.
>
>
>
> These results on G1's pause time control will be published soon on the
> blog of the link above.
>
>
>
> Best regards
>
> Andreas
>
>
>
>
>
>
>
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